After searching a lot I couldn't find a simple way to extract data from .h5
and pass it to a data.Frame
by Numpy
or Pandas
in order to save in .txt
or .csv
file.
import h5pyimport numpy as npimport pandas as pdfilename = 'D:\data.h5'f = h5py.File(filename, 'r')# List all groupsprint("Keys: %s" % f.keys())a_group_key = list(f.keys())[0]# Get the datadata = list(f[a_group_key])pd.DataFrame(data).to_csv("hi.csv")
Keys: <KeysViewHDF5 ['dd48']>
When I print data I see following results:
print(data)
['axis0','axis1','block0_items','block0_values','block1_items','block1_values']
I would appreciate the if someone explain me what are they and how I can extract data completely and save it in .csv file. It seems there hasn't been a routine way to do that and it's kind of challenging yet! Until now I just could see part of data via:
import numpy as np dfm = np.fromfile('D:\data.h5', dtype=float)print (dfm.shape)print(dfm[5:])dfm=pd.to_csv('train.csv')#dfm.to_csv('hi.csv', sep=',', header=None, index=None)
My expectation is to extract time_stamps and measurements in .h5
file.